Phylogenetic summary of ncRNA families
This page provides a summary of the Ensembl phylogenetic analysis of ncRNA families. The following views are available:- Overview
- Gene tree coverage for each species
- Size of gene trees (split by their root taxon)
- Gene tree nodes, and the inference of speciation / duplication events
Gene tree coverage (per species)
Quick links: Primates, Rodents etc.
Favourite species
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | Species-specific duplications |
|---|---|---|---|---|---|---|---|---|
| Human (Homo sapiens) | 41885 | 6142 | 35735 | 180 | 5962 | 259 | ||
| Mouse (Mus musculus reference (CL57BL6) strain) | 38986 | 9088 | 29892 | 496 | 8592 | 732 |
Primates
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | Species-specific duplications |
|---|---|---|---|---|---|---|---|---|
| Human (Homo sapiens) | 41885 | 6142 | 35735 | 180 | 5962 | 259 |
Rodents etc.
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | Species-specific duplications |
|---|---|---|---|---|---|---|---|---|
| Mouse (Mus musculus reference (CL57BL6) strain) | 38986 | 9088 | 29892 | 496 | 8592 | 732 |
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