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31 primates Cactus

This alignment has been generated in Ensembl release 113 and is composed of 10,110,029 blocks (up to 10,413 bp long).

API access

This alignment set can be accessed using the Compara API via the Bio::EnsEMBL::DBSQL::MethodLinkSpeciesSetAdaptor using the method_link_type "CACTUS_DB" and the species_set_name "primates".

SpeciesAssemblyGenome length (bp)Genome coverage (bp)Genome coverage (%)Coding exon length (bp)Coding exon coverage (bp)Coding exon coverage (%)
Human (Homo sapiens)GRCh383,099,750,7182,860,765,65992.2935,953,38335,695,94099.28
Mouse (Mus musculus)GRCm392,728,222,451849,879,60931.1536,889,89427,362,97074.17

Block size distribution

Size range All 10,110,029 alignment blocks
# blocks Total size (incl. gaps)
10 bp - 100 bp
2,793,673
151.5 Mb
100 bp - 1 kb
6,891,220
2.5 Gb
1 kb - 10 kb
424,732
589.1 Mb
10 kb - 100 kb
404
4.0 Mb
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