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63 amniota vertebrates Mercator-Pecan

This alignment has been generated in Ensembl release 111 and is composed of 31,418 blocks (up to 1,000,000 bp long).

API access

This alignment set can be accessed using the Compara API via the Bio::EnsEMBL::DBSQL::MethodLinkSpeciesSetAdaptor using the method_link_type "PECAN" and the species_set_name "amniotes".

SpeciesAssemblyGenome length (bp)Genome coverage (bp)Genome coverage (%)Coding exon length (bp)Coding exon coverage (bp)Coding exon coverage (%)
Human (Homo sapiens)GRCh383,099,750,7181,957,265,15763.1435,869,22331,908,29788.96
Mouse (Mus musculus)GRCm392,728,222,4511,913,810,78470.1536,812,97332,834,23889.19

Block size distribution

Size range All 31,418 alignment blocks
# blocks Total size (incl. gaps)
100 bp - 1 kb
198
137.9 kb
1 kb - 10 kb
1,274
5.7 Mb
10 kb - 100 kb
2,330
102.3 Mb
100 kb - 1 Mb
21,384
17.8 Gb
1 Mb - 10 Mb
6,232
6.2 Gb
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