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43 eutherian mammals EPO

This alignment has been generated in Ensembl release 111 and is composed of 233,219 blocks (up to 985,153 bp long).

API access

This alignment set can be accessed using the Compara API via the Bio::EnsEMBL::DBSQL::MethodLinkSpeciesSetAdaptor using the method_link_type "EPO" and the species_set_name "mammals".

SpeciesAssemblyGenome length (bp)Genome coverage (bp)Genome coverage (%)Coding exon length (bp)Coding exon coverage (bp)Coding exon coverage (%)
Human (Homo sapiens)GRCh383,099,750,7182,744,733,04688.5535,869,22333,995,14694.78
Mouse (Mus musculus)GRCm392,728,222,4512,354,145,50286.2936,812,97332,892,88189.35

Block size distribution

Size range All 233,219 alignment blocks
# blocks Total size (incl. gaps)
10 bp - 100 bp
20
1.7 kb
100 bp - 1 kb
1,174
541.4 kb
1 kb - 10 kb
5,417
28.6 Mb
10 kb - 100 kb
123,901
6.4 Gb
100 kb - 1 Mb
102,249
22.7 Gb
1 Mb - 10 Mb
458
458.0 Mb
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