21 murinae EPO

This alignment has been generated in Ensembl release 105 and is composed of 19,867 blocks (up to 990,194 bp long).

API access

This alignment set can be accessed using the Compara API via the Bio::EnsEMBL::DBSQL::MethodLinkSpeciesSetAdaptor using the method_link_type "EPO" and the species_set_name "murinae".

SpeciesAssemblyGenome length (bp)Genome coverage (bp)Genome coverage (%)Coding exon length (bp)Coding exon coverage (bp)Coding exon coverage (%)
Mouse (Mus musculus)GRCm392,728,222,4512,436,861,87489.3236,539,34434,522,44494.48

Block size distribution

Size range All 19,867 alignment blocks
# blocks Total size (incl. gaps)
10 bp - 100 bp
1
78.0 bp
100 bp - 1 kb
65
32.1 kb
1 kb - 10 kb
237
1.3 Mb
10 kb - 100 kb
4,362
235.2 Mb
100 kb - 1 Mb
8,830
3.2 Gb
1 Mb - 10 Mb
6,372
6.4 Gb
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